This page contains information on the Bio.Ontology python package for testing enrichment of ontology terms in gene sets or gene rankings written by Kamil Koziara and Julia Herman-Iżycka uder supervision of Bartek Wilczyński.
You can find the source code on gihub
You can test the enrichment testing tool in action on our Galaxy demo server.
In terms of documentation, please refer to:
- the application note (draft) describing the software
- the installation manual on github
- the software manual in pdf
- the description of the tool usage in our galaxy demo installation.