2016 Autumn School Agenda

Sunday, October 9th

15:00 – 19:00
Registration
19:00 – 20:00
Dinner

Monday, October 10th

8:00 – 9:00
Breakfast and late registration
9:00 – 10:00
Noam Kaplan: Introduction to Hi-C.
10:00 – 10:20
Coffee break
10:20 – 11:20
Minna Kaikkonen: Identification and characterization of enhancer-promoter interactions.
11:20 – 11:40
Coffee break
11:40 – 12:40
Aleksandra Pękowska: Chromatin domains and compartments – identification and relationship with transcription and DNA replication.
12:40 – 14:30
Lunch break
14:30 – 16:00
Ana Pombo: Genome Architecture Mapping, a novel ligation-free approach to map chromatin contacts.
16:00 – 16:30
Coffee break
16:30 – 18:00
Mario Nicodemi: Polymer models of chromatin large-scale 3D organization.
19:00 – 20:00
Dinner
20:00 – 21:30
Poster Session I

Tuesday, October 11th

8:00 – 9:00
Breakfast
9:00 – 10:30
Aleksandra Pękowska: Identification of chromatin interactions and loops. Towards comparative analysis of interactomes at high resolution.
10:30 – 10:45
Coffee break
10:45 – 11:45
Minna Kaikkonen: Study of chromatin interactions during cellular differentiation and in response to stimuli.
11:45 – 12:00
Coffee break
12:00 – 13:30
Mario Nicodemi: Hierarchical folding of chromatin.
13:30 – 14:30
Lunch break
14:30 – 19:00
Sightseeing trip
19:00 – 20:00
Dinner
20:00 – 21:30
Poster Session II

Wednesday, October 12th

8:00 – 9:00
Breakfast
9:00 – 10:30
Dariusz Plewczyński: Three-dimensional genome architecture of human B-lymphoblastoid cells seen by ChIA-PET: lessons from CTCF and RNAPII-mediated chromatin interactions.
10:30 – 11:00
Coffee break
11:00 – 12:30
Ana Pombo: Modelling large-scale organisation of chromatin: a tale of the HoxB locus.
12:30 – 14:00
Lunch break and photo
14:00 – 15:00
Noam Kaplan: How the genome encodes 3D genome organization.
15:00 – 18:00
Coffee, contributed talks and social activities
18:00 – 21:00
Social dinner & Award for best poster

Thursday, October 13th

8:00 – 9:00
Breakfast
9:00 – 10:30
Dariusz Plewczyński: 3DOME: an integrated 3 Dimensional nucleOme Modeling Engine for data-driven simulation of spatial genome organization.
10:30 – 11:00
Coffee break
11:00 – 12:00
Noam Kaplan: Using Hi-C to solve outstanding problems in genome assembly.
12:00 – 13:30
Lunch break and farewell

Leave a Reply

Your email address will not be published. Required fields are marked *

You may use these HTML tags and attributes: <a href="" title=""> <abbr title=""> <acronym title=""> <b> <blockquote cite=""> <cite> <code> <del datetime=""> <em> <i> <q cite=""> <strike> <strong>